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Here, we will run maelstrom on a dataset that is based on Corces et al..The example file hg19.blood.most_variable.1k.txt contains normalized ATAC-seq read count data for several hematopoietic cell types: Monocytes, CD4+ and CD8+ T cells, NK cells, B cells and erythrocytes.This is a subset of the data and contains only the 1000 most variable peaks (highest standard deviation).There is also a larger file, that contains more regions hg19.blood.most_variable.10k.txt and that will also take longer to run.


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